Procambarus clarkii (Red swamp crayfish, CNS0578487) (FALCON_Pclarkii_2.0)

Procambarus clarkii (Red swamp crayfish, CNS0578487) Assembly and Gene Annotation

About Procambarus clarkii

Procambarus clarkii, known variously as the red swamp crayfish (Procambarus clarkii), Louisiana crawfish or mudbug, is a species of cambarid crayfish native to freshwater bodies of northern Mexico, and southern and southeastern United States, but also introduced elsewhere, where it is often an invasive pest.

Picture credit: Public domain via Wikimedia Commons (Image source) Taxonomy ID 6728

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_040958095.1].

The total length of the assembly is 4028952570 bp contained within 2328 scaffolds. The scaffold N50 value is 42870550, the scaffold L50 value is 40. The GC% content of the assembly is 43.5%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_040958095.1.

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release GCF_040958095.1-RS_2024_10. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyFALCON_Pclarkii_2.0, INSDC Assembly GCA_040958095.1,
Database version116.1
Golden Path Length4,028,968,498
Genebuild byNCBI RefSeq
Genebuild methodImport
Data sourceHuazhong Agricultural University

Gene counts

Coding genes37,059
Non coding genes8,344
Small non coding genes3,631
Long non coding genes4,615
Misc non coding genes98
Pseudogenes1,096
Gene transcripts76,718