Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: XM_006561997

Description

calpain-D, transcript variant X2

Location

About this transcript

This transcript has 12 exons and is annotated with 44 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_624005	5027	1343aa	XP_624008	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AVY4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_006561997	4601	1115aa	XP_006562060	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XR_409268	4140	No protein	-	Nontranslating CDS	-	-

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 4,601 bps, Translation length: 1,115 residues

Version

XM_006561997

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.